It can also change the transparency of the window, and make sure that a program stays on top of all other programs. This can be especially helpful when you are chatting with someone, and you always need to keep an eye on the conversation.
I also use it on Windows Vista to minimze Windows Mail to the system tray, so that I can check my e-mail regularly, just like how outlook can be minimized to the system tray.
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Take also look at Taskbar Helper: http://autoscreenshotmaker.com/minimize-to-system-tray.html. It's also minimizing application to systray, and also provide a lot of features to keep taskbar clean and managed.
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